Detailed information of OS493_019138-T1 in Lophelia pertusa

Genomic Location: scaffold_65:1453589...1472993
NR annotation: KAJ7360047.1, Protein nedd1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P33215Protein NEDD1 OS=Mus musculus OX=10090 GN=Nedd1 PE=1 SV=2
Q3B7M6Protein NEDD1 OS=Bos taurus OX=9913 GN=NEDD1 PE=2 SV=1
Q8NHV4Protein NEDD1 OS=Homo sapiens OX=9606 GN=NEDD1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005133 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_019138-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR052818
all species →		FamilyNEDD1 Spindle Assembly ProteinInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44414
all species →		PROTEIN NEDD1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000242
all species →		Cellular Componentpericentriolar materialInterproscan
GO:0000278
all species →		Biological Processmitotic cell cycleInterproscan
GO:0000922
all species →		Cellular Componentspindle poleInterproscan
GO:0005814
all species →		Cellular ComponentcentrioleInterproscan
GO:0007020
all species →		Biological Processmicrotubule nucleationInterproscan
GO:0036064
all species →		Cellular Componentciliary basal bodyInterproscan
GO:0043015
all species →		Molecular Functiongamma-tubulin bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_019138-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_019138-T1 global co-expression network
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