Detailed information of OS493_019224-T1 in Lophelia pertusa

Genomic Location: scaffold_66:1004353...1016388
NR annotation: KAJ7331633.1, peroxisome biogenesis factor 10 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O60683Peroxisome biogenesis factor 10 OS=Homo sapiens OX=9606 GN=PEX10 PE=1 SV=1
Q8HXW8Peroxisome biogenesis factor 10 OS=Macaca fascicularis OX=9541 GN=PEX10 PE=2 SV=1
B1AUE5Peroxisome biogenesis factor 10 OS=Mus musculus OX=10090 GN=Pex10 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008129 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04757
all species →		Pex2_Pex12Pex2 / Pex12 amino terminal regionFamilyInterproscan
PF13920
all species →		zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR006845
all species →		DomainPex, N-terminalInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR025654
all species →		FamilyPeroxisome biogenesis factor 2/10Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23350
all species →		PEROXISOME ASSEMBLY PROTEIN 10Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005778
all species →		Cellular Componentperoxisomal membraneInterproscan
GO:0007031
all species →		Biological Processperoxisome organizationInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0016558
all species →		Biological Processprotein import into peroxisome matrixInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_019224-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_019224-T1 global co-expression network
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