Detailed information of OS493_019322-T1 in Lophelia pertusa

Genomic Location: scaffold_67:188886...189554
NR annotation: KAJ7391191.1, hypothetical protein OS493_019322 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6MHJ5ATP-dependent DNA helicase Pif1 OS=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100) OX=264462 GN=pif1 PE=1 SV=1
Q59RQ0ATP-dependent DNA helicase PIF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PIF1 PE=1 SV=2
A6ZM04ATP-dependent DNA helicase PIF1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=PIF1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000321 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13538
all species →		UvrD_C_2UvrD-like helicase C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR027785
all species →		DomainUvrD-like helicase C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23274
all species →		DNA HELICASE-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_019322-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03177truB, PUS4, TRUB1; tRNA pseudouridine55 synthaseEC:5.4.99.25
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_019322-T1 global co-expression network
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