Detailed information of OS493_019674-T1 in Lophelia pertusa

Genomic Location: scaffold_70:78280...80649
NR annotation: KAJ7372230.1, 26S proteasome non-ATPase regulatory subunit 5 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0P5A626S proteasome non-ATPase regulatory subunit 5 OS=Bos taurus OX=9913 GN=PSMD5 PE=2 SV=1
Q1640126S proteasome non-ATPase regulatory subunit 5 OS=Homo sapiens OX=9606 GN=PSMD5 PE=1 SV=3
Q8BJY126S proteasome non-ATPase regulatory subunit 5 OS=Mus musculus OX=10090 GN=Psmd5 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007927 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10508
all species →		Proteasom_PSMBProteasome non-ATPase 26S subunitRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019538
all species →		Family26S proteasome non-ATPase regulatory subunit 5Interproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13554
all species →		26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0043248
all species →		Biological Processproteasome assemblyInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_019674-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_019674-T1 global co-expression network
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