Gene detail

Detailed information of OS493_019758-T1 in Lophelia pertusa

Genomic Location: scaffold_70:754301...755428
NR annotation: KAJ7372314.1, hypothetical protein OS493_019758 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BYU6	Torsin-1A-interacting protein 2 OS=Mus musculus OX=10090 GN=Tor1aip2 PE=1 SV=1
Q5R7A3	Torsin-1A-interacting protein 1 OS=Pongo abelii OX=9601 GN=TOR1AIP1 PE=2 SV=1
Q5JTV8	Torsin-1A-interacting protein 1 OS=Homo sapiens OX=9606 GN=TOR1AIP1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002975 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05609 all species →	LAP1_C	Lamina-associated polypeptide 1, AAA+ activator domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038599 all species →	Homologous_superfamily	LAP1C-like, C-terminal domain superfamily	Interproscan
IPR008662 all species →	Family	Torsin-1A-interacting protein 1/2	Interproscan
IPR046753 all species →	Domain	Torsin-1A-interacting protein 1/2, AAA+ activator domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18843 all species →	TORSIN-1A-INTERACTING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001671 all species →	Molecular Function	ATPase activator activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0061024 all species →	Biological Process	membrane organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23001	TOR1AIP; torsin-1A-interacting protein	-	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_019758-T1 global co-expression network