Detailed information of OS493_019768-T1 in Lophelia pertusa

Genomic Location: scaffold_70:877179...880287
NR annotation: KAJ7372324.1, ubiquitin carboxyl-terminal hydrolase [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9WUP7Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Mus musculus OX=10090 GN=Uchl5 PE=1 SV=2
Q9XSJ0Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Bos taurus OX=9913 GN=UCHL5 PE=2 SV=1
Q9Y5K5Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Homo sapiens OX=9606 GN=UCHL5 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006357 (this species only)
Ubiquitin familyDUB|UCH|UCH · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01088
all species →		Peptidase_C12Ubiquitin carboxyl-terminal hydrolase, family 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001578
all species →		DomainPeptidase C12, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR036959
all species →		Homologous_superfamilyPeptidase C12, ubiquitin carboxyl-terminal hydrolase superfamilyInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10589
all species →		UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016579
all species →		Biological Processprotein deubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_019768-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_019768-T1 global co-expression network
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