Detailed information of OS493_019964-T1 in Lophelia pertusa

Genomic Location: scaffold_71:1374256...1385547
NR annotation: KAJ7359057.1, hypothetical protein OS493_019964 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P35492Histidine ammonia-lyase OS=Mus musculus OX=10090 GN=Hal PE=1 SV=1
P21213Histidine ammonia-lyase OS=Rattus norvegicus OX=10116 GN=Hal PE=1 SV=1
P42357Histidine ammonia-lyase OS=Homo sapiens OX=9606 GN=HAL PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002235 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12053
all species →		Par3_HAL_N_termN-terminal of Par3 and HAL proteinsFamilyInterproscan
PF00221
all species →		Lyase_aromaticAromatic amino acid lyaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021922
all species →		DomainPar3/HAL, N-terminalInterproscan
IPR024083
all species →		Homologous_superfamilyFumarase/histidase, N-terminalInterproscan
IPR008948
all species →		Homologous_superfamilyL-Aspartase-likeInterproscan
IPR001106
all species →		FamilyAromatic amino acid lyaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10362
all species →		HISTIDINE AMMONIA-LYASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0004397
all species →		Molecular Functionhistidine ammonia-lyase activityInterproscan
GO:0006548
all species →		Biological ProcessL-histidine catabolic processInterproscan
GO:0016841
all species →		Molecular Functionammonia-lyase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_019964-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_019964-T1 global co-expression network
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