Gene detail

Detailed information of OS493_020176-T1 in Lophelia pertusa

Genomic Location: scaffold_73:1506769...1516912
NR annotation: KAJ7391146.1, Uridine-cytidine kinase-like 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NWZ5	Uridine-cytidine kinase-like 1 OS=Homo sapiens OX=9606 GN=UCKL1 PE=1 SV=2
Q91YL3	Uridine-cytidine kinase-like 1 OS=Mus musculus OX=10090 GN=Uckl1 PE=1 SV=1
Q8VYB2	Uridine kinase-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=UKL3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000924 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14681 all species →	UPRTase	Uracil phosphoribosyltransferase	Domain	Interproscan
PF00485 all species →	PRK	Phosphoribulokinase / Uridine kinase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006083 all species →	Domain	Phosphoribulokinase/uridine kinase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000836 all species →	Domain	Phosphoribosyltransferase domain	Interproscan
IPR029057 all species →	Homologous_superfamily	Phosphoribosyltransferase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10285 all species →	URIDINE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00761	upp, UPRT; uracil phosphoribosyltransferase	EC:2.4.2.9	Pyrimidine metabolism	ko00240	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_020176-T1 global co-expression network