Detailed information of OS493_020282-T1 in Lophelia pertusa

Genomic Location: scaffold_74:920809...927362
NR annotation: KAJ7384699.1, Reticulon-like protein [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6IFY7Reticulon-1-A OS=Xenopus laevis OX=8355 GN=rtn1-a PE=2 SV=1
Q5J6M8Reticulon-3-A OS=Xenopus laevis OX=8355 GN=rtn3-a PE=2 SV=2
Q99P72Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002033 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02453
all species →		ReticulonReticulonFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003388
all species →		DomainReticulonInterproscan
IPR046964
all species →		FamilyReticulon 1-4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45799
all species →		RETICULON-LIKE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005789
all species →		Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0030424
all species →		Cellular ComponentaxonInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_020282-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_020282-T1 global co-expression network
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