Detailed information of OS493_020413-T1 in Lophelia pertusa

Genomic Location: scaffold_75:467815...504189
NR annotation: KAJ7378815.1, testis- and ovary-specific PAZ domain-containing protein 1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006646 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01535
all species →		PPRPPR repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR051222
all species →		FamilyPentatricopeptide/CCM1 RNA-bindingInterproscan
IPR002885
all species →		RepeatPentatricopeptide repeatInterproscan
IPR036855
all species →		Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47942
all species →		TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_020413-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_020413-T1 global co-expression network
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