Detailed information of OS493_020463-T1 in Lophelia pertusa

Genomic Location: scaffold_75:1169703...1175567
NR annotation: KAJ7378861.1, transcription elongation regulator [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O14776Transcription elongation regulator 1 OS=Homo sapiens OX=9606 GN=TCERG1 PE=1 SV=2
Q8CGF7Transcription elongation regulator 1 OS=Mus musculus OX=10090 GN=Tcerg1 PE=1 SV=2
Q5VWI1Transcription elongation regulator 1-like protein OS=Homo sapiens OX=9606 GN=TCERG1L PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003454 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00397
all species →		WWWW domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001202
all species →		DomainWW domainInterproscan
IPR036020
all species →		Homologous_superfamilyWW domain superfamilyInterproscan
IPR045148
all species →		FamilyTranscription elongation regulator 1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15377
all species →		TRANSCRIPTION ELONGATION REGULATOR 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003712
all species →		Molecular Functiontranscription coregulator activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0070063
all species →		Molecular FunctionRNA polymerase bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_020463-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_020463-T1 global co-expression network
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