Detailed information of OS493_020960-T1 in Lophelia pertusa

Genomic Location: scaffold_79:482752...486663
NR annotation: KAJ7390940.1, hypothetical protein OS493_020960 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8R0S4Voltage-dependent L-type calcium channel subunit beta-4 OS=Mus musculus OX=10090 GN=Cacnb4 PE=1 SV=2
D4A055Voltage-dependent L-type calcium channel subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Cacnb4 PE=1 SV=2
O00305Voltage-dependent L-type calcium channel subunit beta-4 OS=Homo sapiens OX=9606 GN=CACNB4 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001296 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00625
all species →		Guanylate_kinGuanylate kinaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR008145
all species →		DomainGuanylate kinase/L-type calcium channel beta subunitInterproscan
IPR000584
all species →		FamilyVoltage-dependent calcium channel, L-type, beta subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11824
all species →		VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005245
all species →		Molecular Functionvoltage-gated calcium channel activityInterproscan
GO:0005891
all species →		Cellular Componentvoltage-gated calcium channel complexInterproscan
GO:0070588
all species →		Biological Processcalcium ion transmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_020960-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_020960-T1 global co-expression network
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