Detailed information of OS493_021006-T1 in Lophelia pertusa

Genomic Location: scaffold_79:922638...940356
NR annotation: KAJ7390986.1, ARS-binding factor 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O95248Myotubularin-related protein 5 OS=Homo sapiens OX=9606 GN=SBF1 PE=1 SV=4
Q6ZPE2Myotubularin-related protein 5 OS=Mus musculus OX=10090 GN=Sbf1 PE=1 SV=2
Q86WG5Myotubularin-related protein 13 OS=Homo sapiens OX=9606 GN=SBF2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002855 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06602
all species →		Myotub-relatedMyotubularin-like phosphatase domainDomainInterproscan
PF12335
all species →		SBF2Myotubularin protein FamilyInterproscan
PF02893
all species →		GRAMGRAM domainDomainInterproscan
PF00130
all species →		C1_1Phorbol esters/diacylglycerol binding domain (C1 domain)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR010569
all species →		DomainMyotubularin-like, phosphatase domainInterproscan
IPR002219
all species →		DomainProtein kinase C-like, phorbol ester/diacylglycerol-binding domainInterproscan
IPR029021
all species →		Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR022096
all species →		DomainSBF1/SBF2 domainInterproscan
IPR004182
all species →		DomainGRAM domainInterproscan
IPR030564
all species →		FamilyMyotubularin familyInterproscan
IPR046349
all species →		Homologous_superfamilyC1-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10807
all species →		MYOTUBULARIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_021006-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_021006-T1 global co-expression network
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