Detailed information of OS493_021413-T1 in Lophelia pertusa

Genomic Location: scaffold_82:620698...626432
NR annotation: KAJ7371987.1, PDZ domain-containing protein 8 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8NEN9PDZ domain-containing protein 8 OS=Homo sapiens OX=9606 GN=PDZD8 PE=1 SV=1
B9EJ80PDZ domain-containing protein 8 OS=Mus musculus OX=10090 GN=Pdzd8 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005389 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10296
all species →		MMM1Maintenance of mitochondrial morphology protein 1FamilyInterproscan
PF17820
all species →		PDZ_6PDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478
all species →		DomainPDZ domainInterproscan
IPR039275
all species →		FamilyPDZ domain-containing protein 8Interproscan
IPR019411
all species →		DomainMMM1 domainInterproscan
IPR031468
all species →		DomainSynaptotagmin-like mitochondrial-lipid-binding domainInterproscan
IPR041489
all species →		DomainPDZ domain 6Interproscan
IPR036034
all species →		Homologous_superfamilyPDZ superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21519
all species →		PDZ DOMAIN-CONTAINING PROTEIN 8Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0044233
all species →		Cellular Componentmitochondria-associated endoplasmic reticulum membrane contact siteInterproscan
GO:0051560
all species →		Biological Processmitochondrial calcium ion homeostasisInterproscan
GO:1990456
all species →		Biological Processmitochondrion-endoplasmic reticulum membrane tetheringInterproscan
GO:0008289
all species →		Molecular Functionlipid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_021413-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_021413-T1 global co-expression network
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