Detailed information of OS493_021418-T1 in Lophelia pertusa

Genomic Location: scaffold_82:666651...669303
NR annotation: KAJ7371991.1, PDZ domain-containing protein 8 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005389 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_021418-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR039275
all species →		FamilyPDZ domain-containing protein 8Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21519
all species →		PDZ DOMAIN-CONTAINING PROTEIN 8Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0044233
all species →		Cellular Componentmitochondria-associated endoplasmic reticulum membrane contact siteInterproscan
GO:0051560
all species →		Biological Processmitochondrial calcium ion homeostasisInterproscan
GO:1990456
all species →		Biological Processmitochondrion-endoplasmic reticulum membrane tetheringInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_021418-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_021418-T1 global co-expression network
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