Detailed information of OS493_021635-T1 in Lophelia pertusa

Genomic Location: scaffold_84:335035...341640
NR annotation: KAJ7330707.1, Anaphase-promoting complex subunit 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9H1A4Anaphase-promoting complex subunit 1 OS=Homo sapiens OX=9606 GN=ANAPC1 PE=1 SV=1
P53995Anaphase-promoting complex subunit 1 OS=Mus musculus OX=10090 GN=Anapc1 PE=1 SV=2
Q54NC6Anaphase-promoting complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=anapc1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002209 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21282
all species →		APC1_3rdAPC1 beta sandwich domainDomainInterproscan
PF18122
all species →		APC1_CAnaphase-promoting complex sub unit 1 C-terminal domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024990
all species →		FamilyAnaphase-promoting complex subunit 1Interproscan
IPR048971
all species →		DomainAnaphase-promoting complex subunit 1, beta-sandwich domainInterproscan
IPR041221
all species →		DomainAnaphase-promoting complex subunit 1, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12827
all species →		MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005680
all species →		Cellular Componentanaphase-promoting complexInterproscan
GO:0007091
all species →		Biological Processmetaphase/anaphase transition of mitotic cell cycleInterproscan
GO:0031145
all species →		Biological Processanaphase-promoting complex-dependent catabolic processInterproscan
GO:0060090
all species →		Molecular Functionmolecular adaptor activityInterproscan
GO:0070979
all species →		Biological Processprotein K11-linked ubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_021635-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_021635-T1 global co-expression network
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