Detailed information of OS493_022023-T1 in Lophelia pertusa

Genomic Location: scaffold_88:757133...760271
NR annotation: KAJ7371925.1, hypothetical protein OS493_022023 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P25916Polycomb complex protein BMI-1 OS=Mus musculus OX=10090 GN=Bmi1 PE=1 SV=1
Q7T3E6Polycomb complex protein BMI-1-B OS=Danio rerio OX=7955 GN=bmi1b PE=2 SV=1
Q5SDR3Polycomb complex protein BMI-1 OS=Gallus gallus OX=9031 GN=BMI1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000402 (this species only)
Ubiquitin familyULD|UFD|RAWUL · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16207
all species →		RAWULRAWUL domain RING finger- and WD40-associated ubiquitin-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032443
all species →		DomainRAWUL domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10825
all species →		RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENTInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0035102
all species →		Cellular ComponentPRC1 complexInterproscan
GO:1990841
all species →		Molecular Functionpromoter-specific chromatin bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_022023-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_022023-T1 global co-expression network
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