Detailed information of OS493_022139-T1 in Lophelia pertusa

Genomic Location: scaffold_89:1068377...1083532
NR annotation: KAJ7358698.1, hypothetical protein OS493_022139 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y7Z8Myosin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=myo1 PE=1 SV=1
Q0WPU1Myosin-15 OS=Arabidopsis thaliana OX=3702 GN=XI-I PE=1 SV=1
A7TDZ8Myosin-1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=MYO1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000789 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03166
all species →		MH2MH2 domainFamilyInterproscan
PF00063
all species →		Myosin_headMyosin head (motor domain)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001132
all species →		DomainSMAD domain, Dwarfin-typeInterproscan
IPR001609
all species →		DomainMyosin head, motor domainInterproscan
IPR036961
all species →		Homologous_superfamilyKinesin motor domain superfamilyInterproscan
IPR017855
all species →		Homologous_superfamilySMAD-like domain superfamilyInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR008984
all species →		Homologous_superfamilySMAD/FHA domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13140
all species →		MYOSINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000146
all species →		Molecular Functionmicrofilament motor activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0007015
all species →		Biological Processactin filament organizationInterproscan
GO:0015629
all species →		Cellular Componentactin cytoskeletonInterproscan
GO:0030050
all species →		Biological Processvesicle transport along actin filamentInterproscan
GO:0031982
all species →		Cellular ComponentvesicleInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003774
all species →		Molecular Functioncytoskeletal motor activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0016459
all species →		Cellular Componentmyosin complexInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_022139-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_022139-T1 global co-expression network
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