Detailed information of OS493_022287-T1 in Lophelia pertusa

Genomic Location: scaffold_90:1331152...1336707
NR annotation: KAJ7330672.1, Proline-, glutamic acid- and leucine-rich protein 1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005112 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08166
all species →		PELP1_HEATPELP1, middle domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012980
all species →		DomainPELP1, middle domainInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34105
all species →		PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006364
all species →		Biological ProcessrRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_022287-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_022287-T1 global co-expression network
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