Detailed information of OS493_022532-T1 in Lophelia pertusa

Genomic Location: scaffold_93:974257...998035
NR annotation: KAJ7378547.1, Bifunctional glutamate/proline--tRNA ligase [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7SIA2Bifunctional glutamate/proline--tRNA ligase OS=Cricetulus griseus OX=10029 GN=EPRS1 PE=1 SV=3
P07814Bifunctional glutamate/proline--tRNA ligase OS=Homo sapiens OX=9606 GN=EPRS1 PE=1 SV=5
Q8CGC7Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003201 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03950
all species →		tRNA-synt_1c_CtRNA synthetases class I (E and Q), anti-codon binding domainDomainInterproscan
PF00749
all species →		tRNA-synt_1ctRNA synthetases class I (E and Q), catalytic domainDomainInterproscan
PF00043
all species →		GST_CGlutathione S-transferase, C-terminal domainDomainInterproscan
PF09335
all species →		SNARE_assocSNARE associated Golgi proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020059
all species →		DomainGlutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domainInterproscan
IPR011035
all species →		Homologous_superfamilyLarge ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyInterproscan
IPR020061
all species →		Homologous_superfamilyGlutamine-tRNA ligase, alpha-bundle domain superfamilyInterproscan
IPR020058
all species →		DomainGlutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domainInterproscan
IPR004046
all species →		DomainGlutathione S-transferase, C-terminalInterproscan
IPR050132
all species →		FamilyGlutamine/Glutamate--tRNA LigaseInterproscan
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR000924
all species →		FamilyGlutamyl/glutaminyl-tRNA synthetaseInterproscan
IPR004526
all species →		FamilyGlutamyl-tRNA synthetase, archaeal/eukaryotic cytosolicInterproscan
IPR036282
all species →		Homologous_superfamilyGlutathione S-transferase, C-terminal domain superfamilyInterproscan
IPR001412
all species →		Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR032816
all species →		DomainVTT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43097
all species →		GLUTAMINE-TRNA LIGASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0043039
all species →		Biological ProcesstRNA aminoacylationInterproscan
GO:0004818
all species →		Molecular Functionglutamate-tRNA ligase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006424
all species →		Biological Processglutamyl-tRNA aminoacylationInterproscan
GO:0017102
all species →		Cellular Componentmethionyl glutamyl tRNA synthetase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_022532-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_022532-T1 global co-expression network
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