Detailed information of OS493_022980-T1 in Lophelia pertusa

Genomic Location: scaffold_99:428530...431558
NR annotation: KAJ7378446.1, Crystallin, lambda 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q811X6Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3
Q99KP3Lambda-crystallin homolog OS=Mus musculus OX=10090 GN=Cryl1 PE=1 SV=3
Q8SPX7Lambda-crystallin homolog OS=Bos taurus OX=9913 GN=CRYL1 PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004239 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02737
all species →		3HCDH_N3-hydroxyacyl-CoA dehydrogenase, NAD binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006176
all species →		Domain3-hydroxyacyl-CoA dehydrogenase, NAD bindingInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48075
all species →		3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006631
all species →		Biological Processfatty acid metabolic processInterproscan
GO:0070403
all species →		Molecular FunctionNAD+ bindingInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0050104
all species →		Molecular FunctionL-gulonate 3-dehydrogenase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_022980-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_022980-T1 global co-expression network
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