Detailed information of OS493_022981-T1 in Lophelia pertusa

Genomic Location: scaffold_99:431582...433024
NR annotation: KAJ7378447.1, Crystallin, lambda 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P14755Lambda-crystallin OS=Oryctolagus cuniculus OX=9986 GN=CRYL1 PE=1 SV=3
Q8SPX7Lambda-crystallin homolog OS=Bos taurus OX=9913 GN=CRYL1 PE=2 SV=3
Q9Y2S2Lambda-crystallin homolog OS=Homo sapiens OX=9606 GN=CRYL1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004239 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00725
all species →		3HCDH3-hydroxyacyl-CoA dehydrogenase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013328
all species →		Homologous_superfamily6-phosphogluconate dehydrogenase, domain 2Interproscan
IPR008927
all species →		Homologous_superfamily6-phosphogluconate dehydrogenase-like, C-terminal domain superfamilyInterproscan
IPR006108
all species →		Domain3-hydroxyacyl-CoA dehydrogenase, C-terminalInterproscan

 PANTHER
No PANTHER signature was detected for OS493_022981-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0006631
all species →		Biological Processfatty acid metabolic processInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0016616
all species →		Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_022981-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_022981-T1 global co-expression network
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