Detailed information of OS493_023225-T1 in Lophelia pertusa

Genomic Location: scaffold_101:547801...552615
NR annotation: KAJ7357751.1, Phosphoglucomutase-1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q08DP0Phosphoglucomutase-1 OS=Bos taurus OX=9913 GN=PGM1 PE=2 SV=1
Q4R5E4Phosphoglucomutase-1 OS=Macaca fascicularis OX=9541 GN=PGM1 PE=2 SV=3
P36871Phosphoglucomutase-1 OS=Homo sapiens OX=9606 GN=PGM1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004778 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00408
all species →		PGM_PMM_IVPhosphoglucomutase/phosphomannomutase, C-terminal domainRepeatInterproscan
PF02880
all species →		PGM_PMM_IIIPhosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain IIIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016055
all species →		Homologous_superfamilyAlpha-D-phosphohexomutase, alpha/beta/alpha I/II/IIIInterproscan
IPR045244
all species →		FamilyPhosphoglucomutaseInterproscan
IPR036900
all species →		Homologous_superfamilyAlpha-D-phosphohexomutase, C-terminal domain superfamilyInterproscan
IPR005843
all species →		DomainAlpha-D-phosphohexomutase, C-terminalInterproscan
IPR005846
all species →		DomainAlpha-D-phosphohexomutase, alpha/beta/alpha domain IIIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22573
all species →		PHOSPHOHEXOMUTASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan
GO:0016868
all species →		Molecular Functionintramolecular phosphotransferase activityInterproscan
GO:0004614
all species →		Molecular Functionphosphoglucomutase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0071704
all species →		Biological Processobsolete organic substance metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_023225-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_023225-T1 global co-expression network
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