Gene detail

Detailed information of OS493_023232-T1 in Lophelia pertusa

Genomic Location: scaffold_101:627165...639079
NR annotation: KAJ7357758.1, Peroxiredoxin-1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0CB50	Peroxiredoxin-1 OS=Gallus gallus OX=9031 GN=PRDX1 PE=1 SV=1
Q6DV14	Peroxiredoxin-1 OS=Gekko japonicus OX=146911 GN=PRDX1 PE=2 SV=1
Q90384	Peroxiredoxin OS=Cynops pyrrhogaster OX=8330 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001467 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10417 all species →	1-cysPrx_C	C-terminal domain of 1-Cys peroxiredoxin	Domain	Interproscan
PF00578 all species →	AhpC-TSA	AhpC/TSA family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050217 all species →	Family	Thiol-specific antioxidant peroxiredoxin	Interproscan
IPR013766 all species →	Domain	Thioredoxin domain	Interproscan
IPR019479 all species →	Domain	Peroxiredoxin, C-terminal	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR000866 all species →	Domain	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10681 all species →	THIOREDOXIN PEROXIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006979 all species →	Biological Process	response to oxidative stress	Interproscan
GO:0008379 all species →	Molecular Function	thioredoxin peroxidase activity	Interproscan
GO:0033554 all species →	Biological Process	cellular response to stress	Interproscan
GO:0042744 all species →	Biological Process	hydrogen peroxide catabolic process	Interproscan
GO:0045454 all species →	Biological Process	cell redox homeostasis	Interproscan
GO:0051920 all species →	Molecular Function	peroxiredoxin activity	Interproscan
GO:0016209 all species →	Molecular Function	antioxidant activity	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_023232-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_023232-T1 global co-expression network