Detailed information of OS493_023280-T1 in Lophelia pertusa

Genomic Location: scaffold_101:1156896...1160199
NR annotation: KAJ7357800.1, Protein Asterix [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A8I3NQW8PAT complex subunit Asterix OS=Canis lupus familiaris OX=9615 GN=WDR83OS PE=1 SV=1
Q9Y284PAT complex subunit Asterix OS=Homo sapiens OX=9606 GN=WDR83OS PE=1 SV=1
Q6ZWX0PAT complex subunit Asterix OS=Mus musculus OX=10090 GN=Wdr83os PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009211 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03669
all species →		ASTERPAT complex subunit AsterixFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005351
all species →		FamilyPAT complex subunit AsterixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13193
all species →		CGI-140Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005789
all species →		Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0044183
all species →		Molecular Functionprotein folding chaperoneInterproscan
GO:0045048
all species →		Biological Processprotein insertion into ER membraneInterproscan
GO:0030176
all species →		Cellular Componentobsolete integral component of endoplasmic reticulum membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24963WDR83OS; PAT complex subunit Asterix-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_023280-T1 global co-expression network
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