Detailed information of OS493_023296-T1 in Lophelia pertusa

Genomic Location: scaffold_102:445331...462588
NR annotation: KAJ7329004.1, hypothetical protein OS493_023296 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96LT7Guanine nucleotide exchange factor C9orf72 OS=Homo sapiens OX=9606 GN=C9orf72 PE=1 SV=2
Q6DFW0Guanine nucleotide exchange factor C9orf72 homolog OS=Mus musculus OX=10090 GN=C9orf72 PE=1 SV=2
Q66HC3Guanine nucleotide exchange factor C9orf72 homolog OS=Rattus norvegicus OX=10116 GN=C9orf72 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005942 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15019
all species →		C9orf72-likeC9orf72-like protein familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027819
all species →		FamilyGuanine nucleotide exchange factor C9orf72Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31855
all species →		GUANINE NUCLEOTIDE EXCHANGE C9ORF72Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005768
all species →		Cellular ComponentendosomeInterproscan
GO:0005776
all species →		Cellular ComponentautophagosomeInterproscan
GO:0006897
all species →		Biological ProcessendocytosisInterproscan
GO:0006914
all species →		Biological ProcessautophagyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_023296-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_023296-T1 global co-expression network
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