Detailed information of OS493_023826-T1 in Lophelia pertusa

Genomic Location: scaffold_107:811649...813975
NR annotation: KAJ7357693.1, Methionine adenosyltransferase 2 subunit beta [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99LB6Methionine adenosyltransferase 2 subunit beta OS=Mus musculus OX=10090 GN=Mat2b PE=1 SV=1
Q29RI9Methionine adenosyltransferase 2 subunit beta OS=Bos taurus OX=9913 GN=MAT2B PE=2 SV=1
Q5U2R0Methionine adenosyltransferase 2 subunit beta OS=Rattus norvegicus OX=10116 GN=Mat2b PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007721 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04321
all species →		RmlD_sub_bindRmlD substrate binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR005913
all species →		FamilydTDP-4-dehydrorhamnose reductase familyInterproscan
IPR029903
all species →		DomainRmlD-like substrate binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10491
all species →		DTDP-4-DEHYDRORHAMNOSE REDUCTASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006556
all species →		Biological ProcessS-adenosylmethionine biosynthetic processInterproscan
GO:0048269
all species →		Cellular Componentmethionine adenosyltransferase complexInterproscan
GO:0048270
all species →		Molecular Functionmethionine adenosyltransferase regulator activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_023826-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_023826-T1 global co-expression network
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