Detailed information of OS493_024229-T1 in Lophelia pertusa

Genomic Location: scaffold_111:1197985...1199748
NR annotation: KAJ7378278.1, 54S ribosomal protein L17 mitochondrial [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006944 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01196
all species →		Ribosomal_L17Ribosomal protein L17FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036373
all species →		Homologous_superfamilyLarge ribosomal subunit protein bL17 superfamilyInterproscan
IPR000456
all species →		FamilyLarge ribosomal subunit protein bL17Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14413
all species →		RIBOSOMAL PROTEIN L17Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0005762
all species →		Cellular Componentmitochondrial large ribosomal subunitInterproscan
GO:0015934
all species →		Cellular Componentlarge ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_024229-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_024229-T1 global co-expression network
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