Detailed information of OS493_024701-T1 in Lophelia pertusa

Genomic Location: scaffold_117:41487...45091
NR annotation: KAJ7378039.1, ATP-binding cassette sub- F member 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6P542ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=1 SV=1
Q6MG08ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus OX=10116 GN=Abcf1 PE=1 SV=1
Q8NE71ATP-binding cassette sub-family F member 1 OS=Homo sapiens OX=9606 GN=ABCF1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001001 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_024701-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR050611
all species →		FamilyATP-binding cassette sub-family F member, EF3 subfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19211
all species →		ATP-BINDING TRANSPORT PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_024701-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_024701-T1 global co-expression network
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