Detailed information of OS493_024704-T1 in Lophelia pertusa

Genomic Location: scaffold_117:67990...72470
NR annotation: KAJ7378042.1, TLC domain-containing protein 2 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A8WGS4TLC domain-containing protein 2 OS=Danio rerio OX=7955 GN=tlcd2 PE=2 SV=1
Q8VC26TLC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Tlcd2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003602 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03798
all species →		TRAM_LAG1_CLN8TLC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006634
all species →		DomainTRAM/LAG1/CLN8 homology domainInterproscan
IPR050846
all species →		FamilyTLC domain-containingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13439
all species →		CT120 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0007009
all species →		Biological Processplasma membrane organizationInterproscan
GO:0055088
all species →		Biological Processlipid homeostasisInterproscan
GO:0055091
all species →		Biological Processphospholipid homeostasisInterproscan
GO:0071709
all species →		Biological Processmembrane assemblyInterproscan
GO:0097035
all species →		Biological Processregulation of membrane lipid distributionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_024704-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_024704-T1 global co-expression network
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