Detailed information of OS493_024761-T1 in Lophelia pertusa

Genomic Location: scaffold_117:589832...591240
NR annotation: KAJ7378098.1, hypothetical protein OS493_024761 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P62897Cytochrome c, somatic OS=Mus musculus OX=10090 GN=Cycs PE=1 SV=2
P62898Cytochrome c, somatic OS=Rattus norvegicus OX=10116 GN=Cycs PE=1 SV=2
P00021Cytochrome c OS=Columba livia OX=8932 GN=CYC PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004990 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00034
all species →		Cytochrom_CCytochrome cDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036909
all species →		Homologous_superfamilyCytochrome c-like domain superfamilyInterproscan
IPR009056
all species →		DomainCytochrome c-like domainInterproscan
IPR002327
all species →		FamilyCytochrome c, class IA/ IBInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11961
all species →		CYTOCHROME CInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009055
all species →		Molecular Functionelectron transfer activityInterproscan
GO:0020037
all species →		Molecular Functionheme bindingInterproscan
GO:0005758
all species →		Cellular Componentmitochondrial intermembrane spaceInterproscan
GO:0006122
all species →		Biological Processmitochondrial electron transport, ubiquinol to cytochrome cInterproscan
GO:0006123
all species →		Biological Processmitochondrial electron transport, cytochrome c to oxygenInterproscan
GO:0043280
all species →		Biological Processobsolete positive regulation of cysteine-type endopeptidase activity involved in apoptotic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K08738CYC; cytochrome c-Platinum drug resistanceko01524deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_024761-T1 global co-expression network
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