Detailed information of OS493_024897-T1 in Lophelia pertusa

Genomic Location: scaffold_118:1036375...1036818
NR annotation: KAJ7371555.1, hypothetical protein OS493_024897 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q15782Chitinase-3-like protein 2 OS=Homo sapiens OX=9606 GN=CHI3L2 PE=1 SV=1
Q95M17Acidic mammalian chitinase OS=Bos taurus OX=9913 GN=CHIA PE=1 SV=1
Q6RY07Acidic mammalian chitinase OS=Rattus norvegicus OX=10116 GN=Chia PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000804 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00704
all species →		Glyco_hydro_18Glycosyl hydrolases family 18DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001223
all species →		DomainGlycoside hydrolase family 18, catalytic domainInterproscan
IPR017853
all species →		Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR050314
all species →		FamilyGlycosyl Hydrolase Family 18Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11177
all species →		CHITINASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan
GO:0004568
all species →		Molecular Functionchitinase activityInterproscan
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan
GO:0006032
all species →		Biological Processchitin catabolic processInterproscan
GO:0008061
all species →		Molecular Functionchitin bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_024897-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_024897-T1 global co-expression network
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