Detailed information of OS493_024956-T1 in Lophelia pertusa

Genomic Location: scaffold_119:445088...445597
NR annotation: KAJ7357443.1, BEN domain-containing protein 3 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000665 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10523
all species →		BENBEN domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018379
all species →		DomainBEN domainInterproscan
IPR033583
all species →		FamilyBEN domain-containing protein 3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR28665
all species →		BEN DOMAIN-CONTAINING PROTEIN 3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0000183
all species →		Biological ProcessrDNA heterochromatin formationInterproscan
GO:0000792
all species →		Cellular ComponentheterochromatinInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02992RP-S7, MRPS7, rpsG; small subunit ribosomal protein S7-Ribosomeko03011deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_024956-T1 global co-expression network
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