Detailed information of OS493_025181-T1 in Lophelia pertusa

Genomic Location: scaffold_121:1041025...1044660
NR annotation: KAJ7390478.1, regulation of synaptic plasticity by receptor localization to synapse [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P59672Ankyrin repeat and SAM domain-containing protein 1A OS=Mus musculus OX=10090 GN=Anks1a PE=1 SV=3
Q92625Ankyrin repeat and SAM domain-containing protein 1A OS=Homo sapiens OX=9606 GN=ANKS1A PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003331 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796
all species →		Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110
all species →		RepeatAnkyrin repeatInterproscan
IPR036770
all species →		Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR033635
all species →		FamilyAnkyrin repeat and SAM domain-containing protein 1/CaskinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24174
all species →		ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_025181-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_025181-T1 global co-expression network
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