Detailed information of OS493_025446-T1 in Lophelia pertusa

Genomic Location: scaffold_125:570953...576007
NR annotation: KAJ7356337.1, RCC1 domain-containing protein 1 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4R828RCC1 domain-containing protein 1 OS=Macaca fascicularis OX=9541 GN=RCCD1 PE=2 SV=1
A6NED2RCC1 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RCCD1 PE=1 SV=1
Q8BTU7RCC1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rccd1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007222 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00415
all species →		RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000408
all species →		RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR009091
all species →		Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR052830
all species →		FamilyRCC1 domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46849
all species →		RCC1 DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_025446-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_025446-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_025446-T1 global co-expression network
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