Detailed information of OS493_025507-T1 in Lophelia pertusa

Genomic Location: scaffold_126:67164...70808
NR annotation: KAJ7328108.1, X-ray radiation resistance-associated protein 1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005894 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00560
all species →		LRR_1Leucine Rich RepeatRepeatInterproscan
PF12799
all species →		LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR025875
all species →		RepeatLeucine rich repeat 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22710
all species →		X-RAY RADIATION RESISTANCE ASSOCIATED PROTEIN 1 XRRA1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_025507-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_025507-T1 global co-expression network
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