Detailed information of OS493_025661-T1 in Lophelia pertusa

Genomic Location: scaffold_127:969961...975077
NR annotation: KAJ7390404.1, SET and MYND domain-containing protein 5 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZIZ2Protein-lysine N-trimethyltransferase SMYD5 OS=Gallus gallus OX=9031 GN=SMYD5 PE=2 SV=1
Q6GPQ4Protein-lysine N-trimethyltransferase SMYD5 OS=Xenopus laevis OX=8355 GN=smyd5 PE=2 SV=1
Q6GMV2Protein-lysine N-trimethyltransferase SMYD5 OS=Homo sapiens OX=9606 GN=SMYD5 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006582 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00856
all species →		SETSET domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044422
all species →		DomainSMYD5, SET domainInterproscan
IPR046341
all species →		Homologous_superfamilySET domain superfamilyInterproscan
IPR001214
all species →		DomainSET domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46402
all species →		SET AND MYND DOMAIN-CONTAINING PROTEIN 5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0042799
all species →		Molecular Functionhistone H4K20 methyltransferase activityInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0045814
all species →		Biological Processnegative regulation of gene expression, epigeneticInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_025661-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_025661-T1 global co-expression network
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