Detailed information of OS493_025728-T1 in Lophelia pertusa

Genomic Location: scaffold_128:838987...839760
NR annotation: KAJ7383852.1, Protein yipf5 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q66KA5Protein YIPF5 OS=Xenopus tropicalis OX=8364 GN=yipf5 PE=2 SV=1
Q7SXS2Protein YIPF5 OS=Xenopus laevis OX=8355 GN=yipf5 PE=2 SV=1
Q6P5I8Protein YIPF5 OS=Danio rerio OX=7955 GN=yipf5 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003498 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_025728-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR045231
all species →		FamilyProtein Yip1/4-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21236
all species →		GOLGI MEMBRANE PROTEIN YIP1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005802
all species →		Cellular Componenttrans-Golgi networkInterproscan
GO:0006888
all species →		Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0048280
all species →		Biological Processvesicle fusion with Golgi apparatusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20363YIPF5_7, YIP1; protein YIPF5/7-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_025728-T1 global co-expression network
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