Detailed information of OS493_025782-T1 in Lophelia pertusa

Genomic Location: scaffold_129:382290...392344
NR annotation: KAJ7377888.1, Striatin-interacting protein 2 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q803T2Striatin-interacting protein 1 homolog OS=Danio rerio OX=7955 GN=strip1 PE=1 SV=1
Q8C079Striatin-interacting protein 1 OS=Mus musculus OX=10090 GN=Strip1 PE=1 SV=2
Q0P5J8Striatin-interacting protein 1 OS=Bos taurus OX=9913 GN=STRIP1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003401 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11882
all species →		DUF3402Domain of unknown function (DUF3402)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040185
all species →		FamilyFar11/STRPInterproscan
IPR021819
all species →		DomainFar11/STRP, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13239
all species →		PROTEIN REQUIRED FOR HYPHAL ANASTOMOSIS HAM-2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0007010
all species →		Biological Processcytoskeleton organizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_025782-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_025782-T1 global co-expression network
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