Detailed information of OS493_025822-T1 in Lophelia pertusa

Genomic Location: scaffold_129:1055795...1062719
NR annotation: KAJ7377927.1, hypothetical protein OS493_025822 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6B855Transketolase OS=Bos taurus OX=9913 GN=TKT PE=2 SV=1
P50137Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1
P40142Transketolase OS=Mus musculus OX=10090 GN=Tkt PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002952 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00456
all species →		Transketolase_NTransketolase, thiamine diphosphate binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051424
all species →		FamilyTransketolase-likeInterproscan
IPR005474
all species →		DomainTransketolase, N-terminalInterproscan
IPR049557
all species →		Conserved_siteTransketolase conserved siteInterproscan
IPR029061
all species →		Homologous_superfamilyThiamin diphosphate-binding foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43195
all species →		TRANSKETOLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004802
all species →		Molecular Functiontransketolase activityInterproscan
GO:0030976
all species →		Molecular Functionthiamine pyrophosphate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00615E2.2.1.1, tktA, tktB; transketolaseEC:2.2.1.1
Biosynthesis of ansamycinsko01051deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_025822-T1 global co-expression network
TOP