Gene detail

Detailed information of OS493_025823-T1 in Lophelia pertusa

Genomic Location: scaffold_129:1063145...1064660
NR annotation: KAJ7377928.1, hypothetical protein OS493_025823 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2NKZ4	Transketolase-like protein 2 OS=Bos taurus OX=9913 GN=TKTL2 PE=2 SV=1
Q9H0I9	Transketolase-like protein 2 OS=Homo sapiens OX=9606 GN=TKTL2 PE=1 SV=1
Q9D4D4	Transketolase-like protein 2 OS=Mus musculus OX=10090 GN=Tktl2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002952 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00456 all species →	Transketolase_N	Transketolase, thiamine diphosphate binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005474 all species →	Domain	Transketolase, N-terminal	Interproscan
IPR051424 all species →	Family	Transketolase-like	Interproscan
IPR029061 all species →	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43195 all species →	TRANSKETOLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004802 all species →	Molecular Function	transketolase activity	Interproscan
GO:0030976 all species →	Molecular Function	thiamine pyrophosphate binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_025823-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_025823-T1 global co-expression network