Detailed information of OS493_026173-T1 in Lophelia pertusa

Genomic Location: scaffold_133:650794...660002
NR annotation: KAJ7390298.1, hypothetical protein OS493_026173 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009875 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12929
all species →		Mid1Stretch-activated Ca2+-permeable channel componentDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024338
all species →		FamilyStretch-activated cation channel Mid1/Calcium influx-promoting protein Ehs1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15819
all species →		TRANSMEMBRANE PROTEIN FAM155Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0015275
all species →		Molecular Functionstretch-activated, monoatomic cation-selective, calcium channel activityInterproscan
GO:0098703
all species →		Biological Processcalcium ion import across plasma membraneInterproscan
GO:0005262
all species →		Molecular Functioncalcium channel activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_026173-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_026173-T1 global co-expression network
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