Gene detail

Detailed information of OS493_026232-T1 in Lophelia pertusa

Genomic Location: scaffold_134:238302...244925
NR annotation: KAJ7383702.1, hypothetical protein OS493_026232 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9VKA4	Probable G-protein coupled receptor CG31760 OS=Drosophila melanogaster OX=7227 GN=CG31760 PE=1 SV=3
Q86HH3	Metabotropic glutamate receptor-like protein B OS=Dictyostelium discoideum OX=44689 GN=grlB PE=2 SV=2
Q55AP1	Metabotropic glutamate receptor-like protein A OS=Dictyostelium discoideum OX=44689 GN=grlA PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001303 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00003 all species →	7tm_3	7 transmembrane sweet-taste receptor of 3 GCPR	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017978 all species →	Domain	GPCR family 3, C-terminal	Interproscan
IPR043458 all species →	Family	G-protein coupled receptor 158/179	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32546 all species →	G-PROTEIN COUPLED RECEPTOR 158-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23727	CERS5_6, LASS5_6; sphingoid base N-palmitoyltransferase	EC:2.3.1.291	Sphingolipid signaling pathway	ko04071	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_026232-T1 global co-expression network