Detailed information of OS493_026305-T1 in Lophelia pertusa

Genomic Location: scaffold_134:805286...816936
NR annotation: KAJ7383773.1, Transcription initiation factor TFIID subunit 1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80UV9Transcription initiation factor TFIID subunit 1 OS=Mus musculus OX=10090 GN=Taf1 PE=1 SV=2
Q60544Transcription initiation factor TFIID subunit 1 OS=Mesocricetus auratus OX=10036 GN=TAF1 PE=2 SV=1
P21675Transcription initiation factor TFIID subunit 1 OS=Homo sapiens OX=9606 GN=TAF1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002847 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12157
all species →		DUF3591Protein of unknown function (DUF3591)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040240
all species →		FamilyTranscription initiation factor TFIID subunit 1Interproscan
IPR022591
all species →		DomainTranscription initiation factor TFIID subunit 1, histone acetyltransferase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13900
all species →		TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004402
all species →		Molecular Functionhistone acetyltransferase activityInterproscan
GO:0005669
all species →		Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006366
all species →		Biological Processtranscription by RNA polymerase IIInterproscan
GO:0016251
all species →		Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0017025
all species →		Molecular FunctionTBP-class protein bindingInterproscan
GO:0051123
all species →		Biological ProcessRNA polymerase II preinitiation complex assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_026305-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_026305-T1 global co-expression network
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