Gene detail

Detailed information of OS493_026384-T1 in Lophelia pertusa

Genomic Location: scaffold_135:596317...600738
NR annotation: KAJ7377817.1, Exonuclease mut-7 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8N9H8	Exonuclease mut-7 homolog OS=Homo sapiens OX=9606 GN=EXD3 PE=1 SV=3
P34603	Uncharacterized protein ZK1098.3 OS=Caenorhabditis elegans OX=6239 GN=ZK1098.3 PE=4 SV=2
Q179T2	Exonuclease mut-7 homolog OS=Aedes aegypti OX=7159 GN=AAEL005527 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004185 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01927 all species →	Mut7-C	Mut7-C RNAse domain	Domain	Interproscan
PF01612 all species →	DNA_pol_A_exo1	3'-5' exonuclease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052408 all species →	Family	Exonuclease MUT-7-like	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR002782 all species →	Domain	Mut7-C RNAse domain	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR002562 all species →	Domain	3'-5' exonuclease domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47765 all species →	3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0006139 all species →	Biological Process	nucleobase-containing compound metabolic process	Interproscan
GO:0008408 all species →	Molecular Function	3'-5' exonuclease activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09122	K09122; uncharacterized protein	-	Function unknown	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_026384-T1 global co-expression network