Detailed information of OS493_026429-T1 in Lophelia pertusa

Genomic Location: scaffold_136:47136...82975
NR annotation: KAJ7371331.1, sorting nexin 13 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6PHS6Sorting nexin-13 OS=Mus musculus OX=10090 GN=Snx13 PE=2 SV=1
Q9Y5W8Sorting nexin-13 OS=Homo sapiens OX=9606 GN=SNX13 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003876 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08628
all species →		Nexin_CSorting nexin C terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013937
all species →		DomainSorting nexin, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22775
all species →		SORTING NEXINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005769
all species →		Cellular Componentearly endosomeInterproscan
GO:0035091
all species →		Molecular Functionphosphatidylinositol bindingInterproscan
GO:0043231
all species →		Cellular Componentintracellular membrane-bounded organelleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_026429-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_026429-T1 global co-expression network
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