Gene detail

Detailed information of OS493_026825-T1 in Lophelia pertusa

Genomic Location: scaffold_140:677890...685161
NR annotation: KAJ7383639.1, 28S ribosomal protein S35, mitochondrial [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2YDF6	Small ribosomal subunit protein mS35 OS=Bos taurus OX=9913 GN=MRPS35 PE=1 SV=1
P82673	Small ribosomal subunit protein mS35 OS=Homo sapiens OX=9606 GN=MRPS35 PE=1 SV=1
Q8BJZ4	Small ribosomal subunit protein mS35 OS=Mus musculus OX=10090 GN=Mrps35 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007959 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10213 all species →	MRP-S28	Mitochondrial ribosomal subunit protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019349 all species →	Domain	Small ribosomal subunit protein mS35, mitochondrial, conserved domain	Interproscan
IPR039848 all species →	Family	Small ribosomal subunit protein mS35, mitochondrial	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13490 all species →	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S28	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005763 all species →	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0032543 all species →	Biological Process	mitochondrial translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17413	MRPS35; small subunit ribosomal protein S35	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_026825-T1 global co-expression network