Detailed information of OS493_026954-T1 in Lophelia pertusa

Genomic Location: scaffold_142:752653...769774
NR annotation: KAJ7371310.1, hypothetical protein OS493_026954 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6PDK2Histone-lysine N-methyltransferase 2D OS=Mus musculus OX=10090 GN=Kmt2d PE=1 SV=2
O14686Histone-lysine N-methyltransferase 2D OS=Homo sapiens OX=9606 GN=KMT2D PE=1 SV=2
Q8NEZ4Histone-lysine N-methyltransferase 2C OS=Homo sapiens OX=9606 GN=KMT2C PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003178 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13832
all species →
zf-HC5HC2H_2PHD-zinc-finger like domainDomainInterproscan
PF00856
all species →
SETSET domainFamilyInterproscan
PF05964
all species →
FYRNF/Y-rich N-terminusFamilyInterproscan
PF05965
all species →
FYRCF/Y rich C-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001214
all species →
DomainSET domainInterproscan
IPR046341
all species →
Homologous_superfamilySET domain superfamilyInterproscan
IPR003616
all species →
DomainPost-SET domainInterproscan
IPR003889
all species →
Conserved_siteFY-rich, C-terminalInterproscan
IPR003888
all species →
Conserved_siteFY-rich, N-terminalInterproscan
IPR034732
all species →
DomainExtended PHD (ePHD) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45888
all species →
HL01030P-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003713
all species →
Molecular Functiontranscription coactivator activityInterproscan
GO:0042393
all species →
Molecular Functionhistone bindingInterproscan
GO:0042800
all species →
Molecular Functionhistone H3K4 methyltransferase activityInterproscan
GO:0044666
all species →
Cellular ComponentMLL3/4 complexInterproscan
GO:0045944
all species →
Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K09188MLL3; [histone H3]-lysine4 N-trimethyltransferase MLL3EC:2.1.1.354
Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_026954-T1 global co-expression network
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