Detailed information of OS493_027002-T1 in Lophelia pertusa

Genomic Location: scaffold_143:446144...471776
NR annotation: KAJ7356076.1, DNA replication complex GINS protein PSF1 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7ZT47DNA replication complex GINS protein PSF1 OS=Xenopus laevis OX=8355 GN=gins1 PE=1 SV=1
A4IFH4DNA replication complex GINS protein PSF1 OS=Bos taurus OX=9913 GN=GINS1 PE=2 SV=1
Q9CZ15DNA replication complex GINS protein PSF1 OS=Mus musculus OX=10090 GN=Gins1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007059 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041
all species →		fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005339
all species →		FamilyGINS complex, subunit Psf1Interproscan
IPR036224
all species →		Homologous_superfamilyGINS, helical bundle-like domain superfamilyInterproscan
IPR003961
all species →		DomainFibronectin type IIIInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036116
all species →		Homologous_superfamilyFibronectin type III superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12914
all species →		PARTNER OF SLD5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000811
all species →		Cellular ComponentGINS complexInterproscan
GO:0006260
all species →		Biological ProcessDNA replicationInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:1902983
all species →		Biological ProcessDNA strand elongation involved in mitotic DNA replicationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_027002-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_027002-T1 global co-expression network
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