Detailed information of OS493_027409-T1 in Lophelia pertusa

Genomic Location: scaffold_149:390847...398802
NR annotation: KAJ7356013.1, hypothetical protein OS493_027409 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q1LU86CBY1-interacting BAR domain-containing protein 1 OS=Danio rerio OX=7955 GN=cibar1 PE=2 SV=1
Q2VR06CBY1-interacting BAR domain-containing protein 1-A OS=Xenopus laevis OX=8355 GN=cibar1-a PE=2 SV=1
Q6GN09CBY1-interacting BAR domain-containing protein 1-B OS=Xenopus laevis OX=8355 GN=cibar1-b PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001896 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06730
all species →		FAM92FAM92 proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027267
all species →		Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR009602
all species →		FamilyCBY1-interacting BAR domain-containing protein/FAM92Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21223
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0035869
all species →		Cellular Componentciliary transition zoneInterproscan
GO:0036064
all species →		Cellular Componentciliary basal bodyInterproscan
GO:0060271
all species →		Biological Processcilium assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23868FAM92; protein FAM92-Cilium and associated proteinsko03037deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_027409-T1 global co-expression network
TOP